I have the eggcrate like you 1/4 inch on the bottom and in some places up to 2 inches of sand.
Now Dr. Ron says that the oxygen deprived areas normally will not happen in anything less than a 6 inch sand bed, I could agree in part with him on this.
In my opinion it can happen underneath the rocks of a 2 or 3 inch sandbed. Factors here would include your rock, the size of your sand, of course the finer the better until you reach mud (which I do not prefer). If you do not have enough water ciruculation. If you were to use the Grunge which is rock rubble and any other thing that could prevent the water ciruculation to your sand bed, if your pods, worms and such are depleted and not turning your sandbed over. If our (yours and mine) rocks are sitting on top of the eggcrate what about those areas that the rock has trapped the sand in those little squares? Will the water flow through it?
I Just feel that we can not say that it is not possable to have an anoxic area where the oxyegen is depleated and hydrogen sulfide could not develop even in a shallow sandbed.
Overall I would say that we are safe. But I worry about the long term possablility in the area underneath my rock.
Perhaps with my own personal sandbed issues I over worry about it. Guess it comes down to preference. But who am I. Certanly not a DR. with years of experience and research, not to mention testing, behind me. Just my opinion.
Thomas