I assume when you say "shoot out" you mean it ejects bubbles into the tank.
This can be caused by several things, but the most likely suspect is simply too much water flow under the new bio load from the live rock (I will also assume this rock is not cured). I'm not familiar with this particular skimmer, but there should be some kind of valve you can use to adjust the air flow to the skimmer. Opening the valve to allow more air into the skimmer should decrease the flow through the skimmer and decrease the amount of bubbles being thrown into the tank..
And for the record, bubbles aren't bad for fish.. they can get stuck in the mouths of coral, but the fish should be able to harmlessly pass the bubbles through the gills.