Let me see if I can explain this with words since I can't draw it out. If you have 10 inch baffles then the water has to rise 10 inches in your intake chamber to get to your fuge, then it has to rise another 10 inches to get out of your fuge, and another 10 inches to get to your return chamber. As the water evaporates you will loose it from somewhere. It won't be from your DT because the pump is pushing water into it. It won't be from your intake chamber because water will be flowing into it from the DT. Since your fuge is next the left over from the intake will fill the fuge. That leaves your return last in line, and in that, that's why it will be lower than the other parts. Does that make sense?
Another way(s) to look at it is like this.
1. If you syphoned out a half gallon from the fuge what would happen? It would stop feeding the return section until the intake could fill it up. But in the mean time the pump is still taking water out of the return section. So once everything starts flowing again the return is lower.
2. If you syphon out a half gallon from the intake then it doesn't feed the fuge and in turn it doesn't feed the return section. But the pump is still running taking water out of the return. Once the intake fills and starts the flow again the return is lower.
3. If you syphon out a half gallon from the DT then the intake is not being fed, hence the fuge is not being fed, hence the return is not being fed. But the pump is still running. So it keeps dropping until the DT rises and starts the flow again.
Remember, just because you have 6 inch baffles does not mean that you can't run your water at 10 inches. Just get some gutter guard and put it on each wall (baffle) of your fuge to keep the cheato from flowing into your other chambers, or any 'critters' you might put in your fuge from migrating to the other chambers.