Yes you can not use a standard "on/off" controller (natural wave, etc) as they generate a "square wave" meaning they cut the pumps on and off. Yes AC produces a "sign wave" so you can only run an AC pump on them but ever time they go off and come back on they may "alternate (start up backwards)" hence the name AC (alternate current). If you do this the units can start in reverse causing problems. This is why it's a good idea to check those koralia and Seios after a power outage.
The new controller will work something like the Seio controller does, it will generate an artificial sine wave that can not alternate, meaning the power never goes fully off it ramps up and down much like the DC current in the Tunze systems do. This allows the pumps to run, slow down a bit then power up again in cycles. If timed right this will lead to some nice random current and wave action. The only controlled nano Stream out there is the Tunze 6055 and it is something like 5 times the cost of a Koralia but again far superior in the end. Vortech an amazing technology, I would love to test drive, just have not gotten to do it yet.