It depends...
Electronic ballasts run the bulbs cooler (still quite warm though). As long as they are not touching the plexiglass they won't harm it. Even if they are touching it the only danger is if that area gets severly splashed after it gets hot.
With a Magnetic ballast the bulbs should be at least an inch away but that's all that's needed. Actually, if I had a Magnetic ballast I would just throw it away and buy an electronic... but that's just me LOL
A fan strategically placed to blow air over the water surface below the bulbs will eliminate most if not all the extra heat.
Guy